BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004G12SP1|AL425291
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 1515 0.0
>3x_Contig1313
Length = 8010
Score = 1515 bits (755), Expect = 0.0
Identities = 814/844 (96%), Gaps = 2/844 (0%)
Strand = Plus / Plus
Query: 14 ctkgtgtcccggatacgcaccaagttaccagtccgagcgaaacccatgacacagcggata 73
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3989 ctggtgtcccggatacgcaccaagttaccagtccgagcgaaacccatgacacagcggata 4048
Query: 74 caaatgtcagtcactcttctgatgcgaatctaataatgcctatgaataatccgaattaca 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4049 caaatgtcagtcactcttctgatgcgaatctaataatgcctatgaataatccgaattaca 4108
Query: 134 aacttataaaggtgctcaaaagtttagagaaaaggtataaattacaaaacgatacgttta 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4109 aacttataaaggtgctcaaaagtttagagaaaaggtataaattacaaaacgatacgttta 4168
Query: 194 gatatttaggttatatganaatgataaagattcttcaaaacgttagggtgaagatcgaat 253
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4169 gatatttaggttatatgaaaatgataaagattcttcaaaacgttagggtgaagatcgaat 4228
Query: 254 ctgaggaagatgctatagagantgggttatcgaaagggttatcgaaaaagattccgtttc 313
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4229 ctgaggaagatgctatagagaatgggttatcgaaagggttatcgaaaaagattccgtttc 4288
Query: 314 ttcttwwactaggcgaatctggctctgagttgaagatggataccagtgagcmaactttac 373
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4289 ttcttaaactaggcgaatctggctctgagttgaagatggataccagtgagcaaactttac 4348
Query: 374 tgtwttttcaagawtgtcacgggataggtgctttcaaatcgawacahtacgtgawtatgg 433
||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||
Sbjct: 4349 tgtattttcaagaatgtcacgggataggtgctttcaaatcgaaacaatacgtgaatatgg 4408
Query: 434 gatactctacttttgaagatcttwtaccgtacatgawttggacgcaattgactggwttag 493
||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 4409 gatactctacttttgaagatcttataccgtacatgaattggacgcaattgactggattag 4468
Query: 494 cgttctatgaagattggcagttgtctattcctagagaggnaacaatgaaacatgnagccw 553
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 4469 cgttctatgaagattggcagttgtctattcctagagaggaaacaatgaaacatgaagcca 4528
Query: 554 tawtacggnaagchatgntcgntgtttttgagaacctctgcatggagataacgggatcat 613
|| ||||| |||| ||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 4529 taatacggaaagcaatgaacgaagttaatgagaacctctgcatggagataacgggatcat 4588
Query: 614 atcgtcggggccaacccagaagtggcgatatcgacattgtagttcatatgccggggcaaa 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4589 atcgtcggggccaacccagaagtggcgatatcgacattgtagttcatatgccggggcaaa 4648
Query: 674 atgatttgaactatatatcacgagaattggaaaaagtcatcattaaattgactgaaacag 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4649 atgatttgaactatatatcacgagaattggaaaaagtcatcattaaattgactgaaacag 4708
Query: 734 gatacatcatctgtcctttgaatttgaacgagactttaaaaagtctgttccaaccatggt 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4709 gatacatcatctgtcctttgaatttgaacgagactttaaaaagtctgttccaaccatggt 4768
Query: 794 tccacaaattattttctcatttcamc-aaccatttgacgtc-aagcctacgatgaaccag 851
|||||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||
Sbjct: 4769 tccacaaattattttctcatttcaacaaaccatttgacgtcaaagcttacgatgaaccag 4828
Query: 852 tgca 855
||||
Sbjct: 4829 tgca 4832
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4870
Number of Sequences: 1807
Number of extensions: 4870
Number of successful extensions: 103
Number of sequences better than 1.0e-20: 1
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)